Anders Stahlberg, Daniel Andersson, Johan Aurelius, Mayram Faiz, Marcela Pekna, Mikael Kubista, Milos Pekny.Defining cell populations with single-cell gene expression profiling: corrleations and identification of astrocyte subpopulations.

Nucl Acids Res (2010)

Robert R. Kitchen, Mikael Kubista, Ales Tichopad.
Statistical aspects of quantitative real-time PCR experiment design.
Methods 50:231–236(2010).

Ales Tichopad, Tzachi Bar, Ladislav Pecen, Robert R Kitchen, Mikael Kubista, Michael W. Pfaffl.
Quality control for quantitative PCR based on amplification compatibility test.
Methods 50:308–312(2010).

Radek Sindelka, Monika Sidova, David Svec, Mikael Kubista.
Spatial expression profiles in the Xenopus laevis oocytes measured with qPCR tomography.
Methods 51:87-91(2010).

Mikael Kubista.
REAL-TIME PCR: where we are and where are we heading.
Drug Discovery World Spring (2010)

Mikael Kubista. Intracellular Gene Expression Profiles Revealed with Real-time PCR Tomography.
Research Spotlight: Gene Expression (2009)

Anders Bergkvist, Vendula Rusnakova, Radek Sindelka, Jose Manuel Andrade Garda, Björn Sjögreen, Daniel Lindh, Amin Forootan, Mikael Kubista.
Gene expression profiling – Clusters of possibilities.
Methods 50:323–335(2010).

Anna Coll, Anna Nadal, Rosa Collado, Gemma Capellades, Mikael Kubista, Joaquima Messeguer, Maria Pla.
Natural variation explains most transcriptomic changes among maize plants of MON810 and comparable non-GM varieties subjected to two N-fertilization farming practices
Plant Mol Biol 73:349–362 (2010).

Anders Bergkvist, Vendula Rusnakova, Radek Sindelka, Jose Manuel Andrade Garda, Björn Sjögreen, Daniel Lindh, Amin Forootan, Mikael Kubista, Methods 50 (2010) 323–335

Anders Ståhlberg, Martin Bengtsson, Martin Hemberg, Henrik Semb, Quantitative Transcription Factor Analysis of Undifferentiated Single Human Embryonic Stem Cells

Omar Omar, Maria Lennerås, Sara Svensson, Felicia Suska,Lena Emanuelsson, Jan Hall, Ulf Nannmark, Peter Thomsen. Integrin and chemokine receptor gene expression in implant-adherent cells during early osseointegration. J Mater Sci: Mater Med DOI 10.1007/s10856-009-3915-x

Omar Omar, BDS; Felicia Suska, PhD; Maria Lennerås, MSc; Neven Zoric, MSc; Sara Svensson, MSc;Jan Hall, MSc; Lena Emanuelsson, BS; Ulf Nannmark, DDS, PhD;Peter Thomsen, MD, PhD. The Influence of Bone Type on the Gene Expression in Normal Bone and at the Bone-Implant Interface: Experiments in Animal Model. Clinical Implant Dentistry and Related Research, Volume *, Number *, 2009

Ales Tichopad, Rob Kitchen, Irmgard Riedmaier, Christiane Becker, Anders Ståhlberg, and Mikael Kubista. Design and Optimization of Reverse-Transcription Quantitative PCR Experiments. Clinical Chemistry 55:10 (2009); doi:10.1373/clinchem.2009.126201

Stephen A. Bustin, Vladimir Benes, Jeremy A. Garson, Jan Hellemans, Jim Huggett, Mikael Kubista, Reinhold Mueller, Tania Nolan, Michael W. Pfaffl, Gregory L. Shipley, Jo Vandesompele,5 and Carl T. Wittwer. The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments. Clinical Chemistry 55,4 (2009)

Thomas U Greiner, Gokul Kesavan, Anders Ståhlberg and Henrik Semb. Rac1 regulates pancreatic islet morphogenesis. BMC Developmental Biology 2009, 9:2 doi:10.1186/1471-213X-9-2

J. Vandesompele, M. Kubista and M. W. Pfaffl “Reference Gene Validation Software for Improved Normalization” Chapter 4 in Real-Time PCR: Current Technology and Applications, Publisher: Caister Academic Press. Editor: Julie Logan, Kirstin Edwards and Nick Saunders ISBN: 978-1-904455-39-4 (2009)

M. W. Pfaffl, J. Vandesompele and M. Kubista” Data Analysis Software” Chapter 5 in Real-Time PCR: Current Technology and Applications, Publisher: Caister Academic Press. Editor: Julie Logan, Kirstin Edwards and Nick Saunders ISBN: 978-1-904455-39-4 (2009)

What is needed to measure a difference with real-time PCR? Mikael Kubista, Johanna Eliasson, Maria Lennerås, Sara Andersson and Robert Sjöback. Eppendorf BioNews No. 29, 2008

Drug Discovery World Summer 2008.
M. Kubista. Emerging real-time PCR applications. Drug Discovery World, 57-66, summer (2008)

Tutorial: Choosing a Normalization Strategy for RT-PCR GenEx System Aids in the Selection of Reference Genes for Standardizing mRNA
Measurements. Genetic Engineering & Biotechnology News 28 (2008)

Multiway real-time PCR gene expression profiling in yeast Saccharomyces cerevisiae reveals altered transcriptional response ofADH-genes to glucose stimuli. Anders Ståhlberg, Karin Elbing, José Manuel Andrade-Garda,
Björn Sjögreen, Amin Forootan, Mikael Kubista, BMC Genomics 2008, 9:170

Intracellular expression profiles measured by real-time PCR tomography in the Xenopus laevis oocyte. R. Sindelka, J. Jona, R. Hands, S.A. Bustin,
M. Kubista, Nucleic Acids Research, 2007, 1–6,

Journal of Cerebral Blood Flow & Metabolism (2007), 1–14

M. Kubista, B. Sjögren, A. Forootan, R. Sindelka, J. Jonak, JM. Andrade. Real-time PCR gene expression profiling. European Pharmaceutical Reviews (2007), Vol. 1.

European Pharmaceutical Review 56

Real-Time PCR Tech Guide - Volyme 1

Real-Time PCR Tech Guide - Volyme 2

Real-Time PCR Tech Guide - Volume 3

Real-Time PCR Tech Guide - Volume 4

Flyer for European Union FP6 Integated Project SmartHealth.

RNA integrity and the effect on the real-time qRT-PCR performance
Simone Fleige, Michael W. Pfaffl

Combining sequence-specific probes and DNA binding dyes in real-time PCR for specific nucleic acid quantification and melting curve analysis, K. Lind, A. Ståhlberg, N. Zoric, M. Kubista, Biotechniques (2006) , Vol 3, 40, 315-319

Thinking outside the BOXTO, BioSpotlight- In this issue, Biotechniques (2006), Vol. 3, 40, 251

The Real-Time Polymerase Chain Reaction, M. Kubista, J.M. Andrade, M. Bengtsson, A. Forootan, J. Jonak, K. Lind, R. Sindelka, R. Sjöback, B. Sjögreen, L. Strömbom, A. Ståhlberg, N. Zoric, Molecular Aspects of Medicine (2006) 27, 95-125

LightUp probes in clinical diagnotics, M. Leijon, M. Mousavi-Jazi, M. Kubista, Molecular Aspects of Medicine (2006) , In Print

Monitoring differentiation of human embryonic stem cells using real-time PCR, K. Noaksson, N. Zoric, X. Zeng, M. S. Rao, J. Hyllner, H. Semb, M. Kubista, P. Sartipy, Stem Cells (2005) 23, 1460-1467

Which mean do you mean? Research Highlights, Nature Reviews Genetics (2005) 6, 1

Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels, M. Bengtsson, A. Stålberg, P. Rorsman, M. Kubista, Genome Research (2005) 1388-1392

Development and evaluation of three real-time immuno-PCR assemblages for quantification of PSA, K.Lind, M. Kubista, J. Immun. Meth. 304 (2005) 107-116

Quantitative real-time PCR for cancer detection: the lymphoma case, A. Stålberg, N. Zoric, P. Åman, M. Kubista, Exp. Rev. Mol. Diagn. 5(2) 2005

Nucleic acid-based technologies: application amplified, M. Kubista, Pharmacogenomics (2004) 5(6), 767-773

Comparison of Reverse Transcriptases in Gene Expression Analysis, A. Stålberg, M. Kubista, M. Pfaffl, Clinical Chemistry, 2004, 50:9, 1678-80

Properties of the Reverse Transcriptase Reaction in mRNA Quantification, A. Stålberg, J. Håkansson, X. Xian, H. Semb, M. Kubista, Clinical Chemistry, 2004, 50:3, 509-515

Kinetic Outlier Detection (KOD) in real-time PCR, T. Bar, A. Stålberg, A. Muszta, M. Kubista, Nucleic Acids Research, 2003, Vol. 31, No. 17 e105

A new minor grove binding assymetric cyanine reporter dye for real-time PCR, M. Bengtsson, J.H. Karlsson, G. Westman, M. Kubista, Nucleic Acids Research, 2003, Vol 31, Nr. 8, e45

The TATAA Biocenter, Sweden, T. Bar, J. Karlsson, K. Lind, A. Ståhlberg, G. Westman, N. Zoric, M. Kubista, Bio-Rad Infocus, 2002, 6-7

Quantitative Real-Time PCR Method for Detection of B-Lymphocyte Monoclonality by Comparison of Kappa and Lambda Immunoglobulin Light Chain Expression, A. Ståhlberg, P. Åman, B. Ridell, P. Mostad, M. Kubista, Clinical Chemistry, 2003, 49:1, 51-59

Real-time Immuno-PCR on the iCycler iQ™ System, K. Lind and M. Kubista, Bioradiations, 2002, Vol. 109, p. 32-33, Technical Note 2805